Index _ | A | B | C | D | E | F | G | H | I | J | L | M | N | P | Q | R | S | T | V _ __init__() (_Pool method) (AffIa__Pool method) (AffIb__Pool method) (AffII__Pool method) (AlphaMN__Pool method) (ContinuousSaver method) (DescendingDrive__Pool method) (ForceModel method) (GIb__Pool method) (GII__Pool method) (GolgiTendonOrganModel method) (HillModel method) (IntramuscularElectrodeArray method) (IntramuscularEMG method) (JointDynamics method) (Muscle method) (Network method) (RecruitmentThresholds method) (SimulationRunner method) (SpindleModel method) (SurfaceElectrodeArray method) (SurfaceEMG method) _Pool (class in myogen.simulator.neuron.populations) A add_noise() (IntramuscularEMG method), [1] (SurfaceEMG method), [1] add_spike() (HillModel method), [1] AffIa__Pool (class in myogen.simulator.neuron.populations) AffIb__Pool (class in myogen.simulator.neuron.populations) AffII__Pool (class in myogen.simulator.neuron.populations) AlphaMN__Pool (class in myogen.simulator.neuron.populations) angle__deg (JointDynamics attribute) (JointDynamics property), [1] angle__rad (JointDynamics attribute) assign_mfs2mns() (Muscle method), [1] assignment (Muscle attribute) (Muscle property), [1] B bag1_activation (SpindleModel property), [1] bag2_activation (SpindleModel property), [1] C calc_observation_points() (IntramuscularElectrodeArray method), [1] chain_activation (SpindleModel property), [1] connect() (Network method), [1] connect_from_external() (Network method), [1] connect_one_to_one() (Network method), [1] connect_to_muscle() (Network method), [1] ContinuousSaver (class in myogen.utils.continuous_saver) contraction_times__samples (ForceModel attribute) (ForceModel property), [1] convert_chunks_to_neo() (in module myogen.utils.continuous_saver) CORTICAL_INPUT__MATRIX (in module myogen.utils.types) create_default_gto_parameters() (GolgiTendonOrganModel static method), [1] create_default_muscle_parameters() (HillModel static method), [1] create_default_spindle_parameters() (SpindleModel static method), [1] create_gto_parameters_for_muscle() (GolgiTendonOrganModel static method), [1] create_ramp_current() (in module myogen.utils.currents) create_sawtooth_current() (in module myogen.utils.currents) create_sinusoidal_current() (in module myogen.utils.currents) create_step_current() (in module myogen.utils.currents) create_trapezoid_current() (in module myogen.utils.currents) CURRENT__AnalogSignal (in module myogen.utils.types) D DescendingDrive__Pool (class in myogen.simulator.neuron.populations) differential_matrix (IntramuscularElectrodeArray attribute) (IntramuscularElectrodeArray property), [1] distribute_innervation_centers() (Muscle method), [1] E electrode_positions (IntramuscularElectrodeArray attribute) (IntramuscularElectrodeArray property), [1] (SurfaceElectrodeArray attribute) (SurfaceElectrodeArray property), [1] F F0 (HillModel property), [1] finalize() (ContinuousSaver method), [1] FORCE__AnalogSignal (in module myogen.utils.types) ForceModel (class in myogen.simulator) G generate_force() (ForceModel method), [1] generate_muscle_fiber_centers() (Muscle method), [1] get_connections() (Network method), [1] get_H_sf() (SurfaceElectrodeArray method), [1] get_initialization_data() (_Pool method), [1] (AffIa__Pool method) (AffIb__Pool method) (AffII__Pool method) (AlphaMN__Pool method) (DescendingDrive__Pool method) (GIb__Pool method) (GII__Pool method) get_model_outputs() (SimulationRunner method), [1] get_netcons() (Network method), [1] get_state() (JointDynamics method), [1] GIb__Pool (class in myogen.simulator.neuron.populations) GII__Pool (class in myogen.simulator.neuron.populations) GolgiTendonOrganModel (class in myogen.simulator.neuron.proprioception) H HillModel (class in myogen.simulator.neuron.muscle) I ib_afferent_firing__Hz (GolgiTendonOrganModel property), [1] initial_positions (IntramuscularElectrodeArray attribute) (IntramuscularElectrodeArray property), [1] inject_currents_and_simulate_spike_trains() (in module myogen.utils.neuron.inject_currents_into_populations) inject_currents_into_populations() (in module myogen.utils.neuron.inject_currents_into_populations) innervation_center_positions__mm (Muscle attribute) (Muscle property), [1] integrate() (GolgiTendonOrganModel method), [1] (HillModel method), [1] (JointDynamics method), [1] (SpindleModel method), [1] intrafusal_tensions (SpindleModel property), [1] INTRAMUSCULAR_EMG__Block (in module myogen.utils.types) intramuscular_emg__Block (IntramuscularEMG attribute) (IntramuscularEMG property), [1] INTRAMUSCULAR_MUAP__Block (in module myogen.utils.types) IntramuscularElectrodeArray (class in myogen.simulator) IntramuscularEMG (class in myogen.simulator) J JOINT_ANGLE__ARRAY (in module myogen.utils.types) JointDynamics (class in myogen.simulator.neuron.joint_dynamics) L L0 (HillModel property), [1] load_nmodl_mechanisms() (in module myogen) M MOMENT_ARM__MATRIX (in module myogen.utils.types) motor_unit_forces (HillModel property), [1] muaps__Block (IntramuscularEMG attribute) (IntramuscularEMG property), [1] (SurfaceEMG attribute) (SurfaceEMG property), [1] Muscle (class in myogen.simulator) muscle_acceleration (HillModel property), [1] muscle_border__mm (Muscle attribute) (Muscle property), [1] muscle_fiber_centers__mm (Muscle attribute) (Muscle property), [1] muscle_fiber_conduction_velocities__mm_per_s (Muscle attribute) (Muscle property), [1] muscle_fiber_diameters__mm (Muscle attribute) (Muscle property), [1] muscle_force (HillModel property), [1] muscle_length (HillModel property), [1] muscle_torque (HillModel property), [1] muscle_velocity (HillModel property), [1] N n_nodes (IntramuscularElectrodeArray attribute) Network (class in myogen.simulator.neuron.network) noisy_intramuscular_emg__Block (IntramuscularEMG attribute) (IntramuscularEMG property), [1] noisy_surface_emg__Block (SurfaceEMG attribute) (SurfaceEMG property), [1] num_channels (IntramuscularElectrodeArray attribute) (IntramuscularElectrodeArray property), [1] (SurfaceElectrodeArray attribute) num_electrodes (SurfaceElectrodeArray attribute) num_points (IntramuscularElectrodeArray attribute) number_of_muscle_fibers (Muscle attribute) (Muscle property), [1] P peak_twitch_forces__unitless (ForceModel attribute) (ForceModel property), [1] plot_antagonist_muscle_comparison() (in module myogen.utils.plotting) plot_gto_dynamics() (in module myogen.utils.plotting) plot_membrane_potentials() (in module myogen.utils.plotting) plot_muscle_dynamics() (in module myogen.utils.plotting) plot_raster_spikes() (in module myogen.utils.plotting) plot_spindle_dynamics() (in module myogen.utils.plotting) pos_theta (SurfaceElectrodeArray attribute) (SurfaceElectrodeArray property), [1] pos_z (SurfaceElectrodeArray attribute) (SurfaceElectrodeArray property), [1] primary_afferent_firing__Hz (SpindleModel property), [1] print_network() (Network method), [1] Q Quantity__deg (in module myogen.utils.types) Quantity__Hz (in module myogen.utils.types) Quantity__m (in module myogen.utils.types) Quantity__m_per_s (in module myogen.utils.types) Quantity__mm (in module myogen.utils.types) Quantity__mm2 (in module myogen.utils.types) Quantity__mm_per_s (in module myogen.utils.types) Quantity__ms (in module myogen.utils.types) Quantity__mV (in module myogen.utils.types) Quantity__nA (in module myogen.utils.types) Quantity__per_mm2 (in module myogen.utils.types) Quantity__pps (in module myogen.utils.types) Quantity__rad (in module myogen.utils.types) Quantity__s (in module myogen.utils.types) Quantity__S_per_m (in module myogen.utils.types) Quantity__uS (in module myogen.utils.types) Quantity__uV (in module myogen.utils.types) R RANDOM_GENERATOR (in module myogen) record_spike() (ContinuousSaver method), [1] record_step() (ContinuousSaver method), [1] recruitment_thresholds (Muscle property), [1] RECRUITMENT_THRESHOLDS__ARRAY (in module myogen.utils.types) RecruitmentThresholds (class in myogen.simulator) reset() (JointDynamics method), [1] resulting_fiber_assignment() (Muscle method), [1] resulting_innervation_areas__mm2 (Muscle attribute) (Muscle property), [1] resulting_number_of_innervated_fibers (Muscle attribute) (Muscle property), [1] rodrigues_rot() (IntramuscularElectrodeArray method), [1] rotate_and_translate() (IntramuscularElectrodeArray method), [1] rt (RecruitmentThresholds attribute), [1] rtz (in module myogen.simulator) (RecruitmentThresholds attribute) run() (SimulationRunner method), [1] S secondary_afferent_firing__Hz (SpindleModel property), [1] SEED (in module myogen) set_linear_trajectory() (IntramuscularElectrodeArray method), [1] set_model_outputs() (SimulationRunner method), [1] set_position() (IntramuscularElectrodeArray method), [1] set_random_seed() (in module myogen) setup_spike_recording() (Network method), [1] signed_muscle_torque (HillModel property), [1] simulate_intramuscular_emg() (IntramuscularEMG method), [1] simulate_muaps() (IntramuscularEMG method), [1] (SurfaceEMG method), [1] simulate_surface_emg() (SurfaceEMG method), [1] SimulationRunner (class in myogen.simulator.neuron.simulation_runner) SPIKE_TRAIN__Block (in module myogen.utils.types) spike_train__Block (IntramuscularEMG attribute) (IntramuscularEMG property), [1] (SurfaceEMG attribute) (SurfaceEMG property), [1] SpindleModel (class in myogen.simulator.neuron.proprioception) SURFACE_EMG__Block (in module myogen.utils.types) surface_emg__Block (SurfaceEMG attribute) (SurfaceEMG property), [1] SURFACE_MUAP__Block (in module myogen.utils.types) SurfaceElectrodeArray (class in myogen.simulator) SurfaceEMG (class in myogen.simulator) T time_vector (HillModel property), [1] (SpindleModel property), [1] traj_mixing_fun() (IntramuscularElectrodeArray method), [1] traj_mixing_mat() (IntramuscularElectrodeArray method), [1] trajectory_transforms (IntramuscularElectrodeArray attribute) (IntramuscularElectrodeArray property), [1] twitch_list (ForceModel attribute) (ForceModel property), [1] twitch_mat (ForceModel attribute) (ForceModel property), [1] type1_activation (HillModel property), [1] type2_activation (HillModel property), [1] V velocity__rad_per_s (JointDynamics attribute)
